Insertion junction: CLIP2.025807_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.025807
Chromosome:chromosome 6
Location:7662551
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g302200 EFH3 (1 of 1) PF13202//PF14252 - EF hand (EF-hand_5) // Domain of unknown function (DUF4347) (DUF4347); EF-hand Calcium binding protein with DUF4346 domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGGCGGCGGGGCAGGCGGCAGTGGCAGCACAGGCGCAAGCACAGGCG
Internal bar code:AAGAGAACCTTATCTTCTTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1850
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GACCGTGTTACATGAGGCCA
Suggested primer 2:CGTGCTTGTAATCATGCCCG