Insertion junction: CLIP2.025830_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.025830
Chromosome:chromosome 9
Location:2799101
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801024 (1 of 30) PF00078//PF03372 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Endonuclease/Exonuclease/phosphatase family (Exo_endo_phos) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCGGCGTAGGTACGCGCAGATGGGCAGTAGAGGATGCACAGACGCAG
Internal bar code:CAACATTGAGGAGCTCACACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4970
LEAP-Seq percent confirming:7.9646
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:104
LEAP-Seq n unique pos:113

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCGAAACGTCACCCTTCT
Suggested primer 2:GCAAAGTGCTATACCGTGCG