Insertion junction: CLIP2.025832_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.025832
Chromosome:chromosome 4
Location:2750149
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g223550 (1 of 26) IPR011990 - Tetratricopeptide-like helical domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCGAGGGCTGGCTCCAGAAGGAGTGGCTAGGGACGCAGAGCGAGACC
Internal bar code:ATCATTGGGGAGTTTCGGAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1572
LEAP-Seq percent confirming:94.5946
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCGCATGAGCTCTTTCA
Suggested primer 2:ACTTGAGCTGCCGTACACTC