Insertion junction: CLIP2.025849_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025849
Chromosome:chromosome 10
Location:6252665
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g463300 (1 of 1) PTHR31515:SF0 - TRANSMEMBRANE PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAAGAGGGGGTCGGGGAGGGAGGTTGGAGAGAGAAGAAGAGCCCAGC
Internal bar code:ATCACAAATCAATTTGATATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:250
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAAGCGTGTGTGTGAGA
Suggested primer 2:GGCATCATGGTGTGGAAGGA