Insertion junction: CLIP2.025850_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.025850
Chromosome:chromosome 12
Location:521072
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801346 (1 of 10) PF00176//PF00271 - SNF2 family N-terminal domain (SNF2_N) // Helicase conserved C-terminal domain (Helicase_C) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAAGGCGATAGGGCGAAGGTGCGGCGGGCCCAGCATCAGCATGCCCGG
Internal bar code:AGGGACTAGCCACTCTTTGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:554
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCGGAGTAGACAGCAGGT
Suggested primer 2:ACCCCTACCCAGCTACTAGC