Insertion junction: CLIP2.025854_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.025854
Chromosome:chromosome 10
Location:3447658
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g801144 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCCGCGTGGTGGGACAGTGGCCGTCAGGTTGACGAAACCTTTGCAAG
Internal bar code:GGTGAGAAAGTGGCAGTAGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1404
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGTGACTTCGGTGAGAGC
Suggested primer 2:ACCCATACTCCCTCCTCACC