Insertion junction: CLIP2.025860_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.025860
Chromosome:chromosome 5
Location:2783286
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g240900 (1 of 1) IPR000001//IPR024079 - Kringle // Metallopeptidase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGGACCCGCGCTCCTGCACCTGTTGCCGACCACTGCAGGCACGGCGCG
Internal bar code:TATTACGTACTAGCTGCCAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:220
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GGCATCACACACACACACAC
Suggested primer 2:CAACCAAGAACTGTGCCTGC