Insertion junction: CLIP2.025864_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.025864
Chromosome:chromosome 12
Location:4120940
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g517050 FAP117 (1 of 7) PF07004 - Sperm-tail PG-rich repeat (SHIPPO-rpt); Flagellar Associated Protein 117 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGAGGCCGGAGAGTCCAGGCAGGGCTCCCGACTTGGACCGGGTGGCGA
Internal bar code:GGTCGCACAATAAGTTCTAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1724
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTTCCCGTTGTTGCTCT
Suggested primer 2:ACCGTCGCGTGTTAAGACTT