Insertion junction: CLIP2.025865_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.025865
Chromosome:chromosome 10
Location:6622880
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g466000 (1 of 1) K18179 - cytochrome c oxidase assembly factor 6 (COA6) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGTAAGGATGATGAGTACATGACTCCGGGTTTCGTCGTCATGACAGCG
Internal bar code:GAAGTACCGGGGGTCAGTGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2013
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTTCCAGTCCGCACACAC
Suggested primer 2:AAAGACTACTCAACGCGGGG