Insertion junction: CLIP2.025870_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.025870
Chromosome:chromosome 4
Location:1131020
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g215900 (1 of 2) IPR006212//IPR009030//IPR011641 - Furin-like repeat // Insulin-like growth factor binding protein, N-terminal // Tyrosine-protein kinase ephrin type A/B receptor-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTTGCACCTACCTTGCAGTACGTGGCGTTGCGTGCGCCCTCCGCCTTT
Internal bar code:TAGGACAGAAGGGAGGAGGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2099
LEAP-Seq percent confirming:98.3871
LEAP-Seq n confirming:122
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:124

Suggested primers for confirmation by PCR

Suggested primer 1:GATCCTGGCTTAGTCGCTCC
Suggested primer 2:CAGGCCAAGCAAAGTGACAC