Insertion junction: CLIP2.025873_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.025873
Chromosome:chromosome 11
Location:3645014
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g478300 SOM4 S-adenosyl-L-methionine-dependent O-methyltransferase; (1 of 4) PTHR13600//PTHR13600:SF12 - LEUCINE CARBOXYL METHYLTRANSFERASE // LEUCINE CARBOXYL METHYLTRANSFERASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAATAGATGCAGGGGGCTGTGTTGGGTCAGGTTGGGGTCGTTTGTTG
Internal bar code:GTAATAGTAATGTGCATAATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1070
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAACATACCGACACGTGT
Suggested primer 2:ACCTCCATCCTCCTCACCTC