Insertion junction: CLIP2.025878_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.025878
Chromosome:chromosome 5
Location:1531552
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234662 (1 of 228) IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGTAGCCGCCACAGCCGGTGAAGGGGCACCGGCGTGCTCCTGCCTTTG
Internal bar code:TGTCTTGTTGGGGTAAAGATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3115
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GGACTTTTCGGCGCTGTTTT
Suggested primer 2:ACGCACCGGTGGATAAAGTT