Insertion junction: CLIP2.025879_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025879
Chromosome:chromosome 12
Location:1858309
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g512250 RRP6b,RRP7 3'-5' endonuclease; (1 of 1) K12591 - exosome complex exonuclease RRP6 (RRP6, EXOSC10) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGCCGTCCCCCGCCTGTTTACCTGCTCGTGGTCGCCCACCCTCCGTC
Internal bar code:ATAGTCAAAGTCTGGTGCTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1074
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAGACCTACCGCAAACCC
Suggested primer 2:ACACATACACATGCAGCCCA