Insertion junction: CLIP2.025881_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.025881
Chromosome:chromosome 9
Location:4400615
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400441 (1 of 1) K11323 - histone arginine demethylase JMJD6 [EC:1.14.11.-] (JMJD6) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCGGAGCGGCGGGAGGGGCGGGAGGAGCCGCAGCGAGGTGACGAGCG
Internal bar code:TGCGTTTTCTTATAACTGATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2035
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGTTGAGTCTGTGAGGCG
Suggested primer 2:GTGACAGTGAAAGGGAGGGG