Insertion junction: CLIP2.025884_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025884
Chromosome:chromosome 5
Location:54982
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241750 PDK3 Pyruvate dehydrogenase kinase; (1 of 2) 2.7.11.2 - [Pyruvate dehydrogenase (acetyl-transferring)] kinase / Pyruvate dehydrogenase kinase (phosphorylating) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACAAAGAGACGGTGGACGACATCTTCGCGCATGCGCTTAAGAAGCAG
Internal bar code:CTGGATACGGGTGCTCGCGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1414
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGCACAAGAACAACAGCACA
Suggested primer 2:GCTGCTAATGTTGATGGCGG