Insertion junction: CLIP2.025923_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.025923
Chromosome:chromosome 12
Location:5407025
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g529301 (1 of 1) PTHR24096//PTHR24096:SF190 - FAMILY NOT NAMED // EBONY CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCAGTGACAGCTGCGACGCACCGCTTGGCGATAAGCATGCGTGTCATT
Internal bar code:ATGTTAGCAGCGACCAGAGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:68
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAGCGTCCACTGACTATC
Suggested primer 2:GGCCTATTCTGTCAGCAGCA