Insertion junction: CLIP2.025924_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025924
Chromosome:chromosome 3
Location:6809544
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197250 (1 of 1) PTHR13948//PTHR13948:SF25 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCGCTGGCCCCAGGGGTGCACCGAGTCACTACCGCCCCCACCCCCAT
Internal bar code:CTTAATCATGTATATGTATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2248
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTGGGAGCCTCTCATTG
Suggested primer 2:TACCCCACATGCTATGCGAC