Insertion junction: CLIP2.025927_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025927
Chromosome:chromosome 6
Location:5307413
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g284700 AAT2 Alanine aminotransferase; (1 of 1) K00814 - alanine transaminase (GPT, ALT) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACAACAACAAAAACCGATACTGCAATCGGCAGTTCGCACACGGACGAA
Internal bar code:AGTATTGTGTGGCCTGGTAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:617
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTTCACGGCTACCCCCAG
Suggested primer 2:AACAGACGACCACTCAGCTG