Insertion junction: CLIP2.025931_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.025931
Chromosome:chromosome 14
Location:3587164
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g801659 CDS
lncRNA_TCONS_00105207 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGCCAGCCGAGAGCGCGCTCGCCCAGCTCCACAGCTAGTATGCGCCA
Internal bar code:CCGGTACGCAGTCATTGAGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:347
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTCTCATTCTTGGGCCT
Suggested primer 2:AGCCCGGAGACTGAAATTGG