Insertion junction: CLIP2.025935_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025935
Chromosome:chromosome 3
Location:227243
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144264 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGAGGTGCAGGGACGGCCGCGCGTGGGCCTCAGCGGCGGGACCTCAA
Internal bar code:TCGCGATTTAGCCGAAGTAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2520
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCAGACCTTGACACTTCA
Suggested primer 2:AAGACTGGCTTGGTCTGTGG