Insertion junction: CLIP2.025936_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025936
Chromosome:chromosome 3
Location:7428173
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206000 (1 of 1) PTHR16301//PTHR16301:SF2 - IMPACT-RELATED // PROTEIN IMPACT HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGCGGACCGGGGTTCTGGTCGCCAACCATGCGTGTCAGGGTGCTGTG
Internal bar code:TACTTCCTCGGTAGCTGGATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3174
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAGGTCGACATCCCTTT
Suggested primer 2:CTTCAGCCACTCCACGAACT