Insertion junction: CLIP2.025950_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.025950
Chromosome:chromosome 6
Location:4324145
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278265 (1 of 30) PTHR24349:SF79 - NITROGEN NETWORK KINASE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGTGCGTGCTAGCGCCGTACCGTATGTGCTACTGGTGGCGGTGGCTG
Internal bar code:GATTTACTAGACATCTGACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:952
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCAATATCGAACAACGGC
Suggested primer 2:TCAGATGCAACAGCTGGAGG