Insertion junction: CLIP2.025975_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.025975
Chromosome:chromosome 12
Location:7038229
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g560450 (1 of 1) IPR004089//IPR009053 - Methyl-accepting chemotaxis protein (MCP) signalling domain // Prefoldin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCCAAAACCCCGCACCTGCGCCTCCTTCAGCTTGGCCTCCAGCTCGCC
Internal bar code:AAGGTTTGATCGGCGTCTGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2596
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAAGGAGGCGCTAATCGA
Suggested primer 2:CCACCTGCTCCTTGCTAGAG