Insertion junction: CLIP2.025985_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.025985
Chromosome:chromosome 4
Location:2245027
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g220350 ATPVA3 Vacuolar ATP synthase subunit A; (1 of 3) K02154 - V-type H+-transporting ATPase subunit a (ATPeV0A, ATP6N) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCTGACTGGTGTGCCCGATGGCAGAGAGGTCTGCGTGAGGCCGTCAC
Internal bar code:GGGTCTGCGCCCTATATTGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:200
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GTATATCAAGGGCCCGGAGC
Suggested primer 2:CGGGTTCTGCAGTTGTTTGG