Insertion junction: CLIP2.025988_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025988
Chromosome:chromosome 7
Location:767466
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g317864 (1 of 15) PF13365 - Trypsin-like peptidase domain (Trypsin_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTAGGCGACAATCCTCTTGTTACATTGGTGCGAAATGCCAGGAGTCA
Internal bar code:AATCGCGGTAATGGGCGGAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2099
LEAP-Seq percent confirming:76.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTAGCAAGCAATCCACA
Suggested primer 2:TGCGTGCTGGTTCAATGTTG