Insertion junction: CLIP2.025994_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.025994
Chromosome:chromosome 3
Location:8574408
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210737 (1 of 726) IPR011009 - Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATGCATGCAGCCCCTCAGTCGTGGAGTGATTAGCGTCAGGTTACGCA
Internal bar code:ATGCGTTTGACACAGTGACTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2769
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGCCACCAGTCAAGCTA
Suggested primer 2:TCCTGACTGTCACGCTTGTC