Insertion junction: CLIP2.025998_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.025998
Chromosome:chromosome 17
Location:4334635
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g730250 PIT,PIT1 (1 of 1) PTHR12175//PTHR12175:SF2 - AD039 HT014 THIOREDOXIN FAMILY TRP26 // SUBFAMILY NOT NAMED; Proteasome-interacting thioredoxin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACACCTCGCCCGTGGACCCCATCAGCGCGATCTTGCACAGCCGCGTCA
Internal bar code:CGGTTCTACATGGTTTGCATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:764
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTATGGGTGCGGGTATG
Suggested primer 2:CCATTTGGGTGCCATAGGGT