Insertion junction: CLIP2.026002_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.026002
Chromosome:chromosome 7
Location:1457307
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00052104

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTCTAGACTGCATGTCTAGCACATTCACGCGCCGGACTTCCACCGGTC
Internal bar code:AATTAGACGTGACTAAGATGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4942
LEAP-Seq percent confirming:98.3871
LEAP-Seq n confirming:122
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:124

Suggested primers for confirmation by PCR

Suggested primer 1:GCTAATGGCGCCGTGTAAAG
Suggested primer 2:AGGGCATCATGGTTACGCAA