Insertion junction: CLIP2.026009_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.026009
Chromosome:chromosome 3
Location:2831543
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162050 HDA4 RPD3/HDA1 type histone deacetylase; (1 of 1) PTHR10625//PTHR10625:SF120 - HISTONE DEACETYLASE // HISTONE DEACETYLASE 15 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAGGTGAGGGTGGCTTGTCGGCGGCACAGAAGAGGCTTGGGTGTGCT
Internal bar code:CAGAGGCACTAGAGGATAAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1451
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCATTGCCGTTACTGATG
Suggested primer 2:CGAGTCCACAAGCTTCTGGT