Insertion junction: CLIP2.026012_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.026012
Chromosome:chromosome 9
Location:663740
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g404750 SRR2 Scavenger receptor cysteine rich (SRCR) protein; (1 of 20) IPR001190//IPR017448 - SRCR domain // SRCR-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATACACGCCCAGCTCACCAGCCAGATGGTGCCGCTGCCGCCGCCGTGTG
Internal bar code:TTACTTCGAATTCCTTCTCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1969
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GATAGCTTGACCGGGCCTAC
Suggested primer 2:GCGTTAGTAATGCTGCCACG