Insertion junction: CLIP2.026022_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.026022
Chromosome:chromosome 8
Location:4181236
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g383702 UBC38 (1 of 2) K10586 - baculoviral IAP repeat-containing protein 6 (apollon) (BIRC6, BRUCE); E2 ubiquitin conjugating enzyme CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTCAGCACTGAAGCCGCTGCAGGTGGGGGCCGGGGGGGGGGGGTTGT
Internal bar code:TCGATAATGTCGCGTCGCCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:278
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGAATGGCAGGGTAACACGA
Suggested primer 2:CGGCACTTCCTTCTTGAGGT