Insertion junction: CLIP2.026024_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.026024
Chromosome:chromosome 7
Location:563320
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g316450 (1 of 1) IPR002625//IPR003892//IPR009060 - Smr domain // Ubiquitin system component Cue // UBA-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGCCGCCCCCGCCAAATCTGCTACTGCCGCAGTTGCCTCCGCCTCCG
Internal bar code:ATTAAATCTGAGGATATCGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1827
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTGTGAGGTCGCACTGAC
Suggested primer 2:CCTGCAGCAGTCATGAGTCA