Insertion junction: CLIP2.026046_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.026046
Chromosome:chromosome 8
Location:3200159
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g376720 CEP7 Cysteine endopeptidase; (1 of 5) 3.4.22.33 - Fruit bromelain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATGGATGAACGGCATTCCGCATTATTGCGCACATGCAGACATGGCGCA
Internal bar code:TATTGGGTGGGGTTGGCAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3579
LEAP-Seq percent confirming:98.2456
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACCTCCATCGATGACGG
Suggested primer 2:CAATCTACCGTCGGGGATGG