Insertion junction: CLIP2.026046_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.026046
Chromosome:chromosome 8
Location:3200160
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g376720 CEP7 Cysteine endopeptidase; (1 of 5) 3.4.22.33 - Fruit bromelain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCATCCAGCCAGCCAGCCAGCCAGATAGCCCAACGCACCTTGCGCAG
Internal bar code:ACCAAGAACAGTCCTACGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3332
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CAATCTACCGTCGGGGATGG
Suggested primer 2:CTCACCTCCATCGATGACGG