Insertion junction: CLIP2.026058_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.026058
Chromosome:chromosome 14
Location:3474907
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g630550 DEG1B,DEG13,DEG12 Deg protease; (1 of 3) PTHR22939//PTHR22939:SF81 - SERINE PROTEASE FAMILY S1C HTRA-RELATED // PROTEASE DO-LIKE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCTGGGGGTGGGGGAGGCGGCTGTGGTTCGGCTGTTTGAGCGGTGGCG
Internal bar code:TAGCGTGGGGCGGTTCGCATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:262
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTCACCAGATGAACCCGC
Suggested primer 2:CGCCCACACAAATTTCAGCT