Insertion junction: CLIP2.026086_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.026086
Chromosome:chromosome 11
Location:1464059
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g469375 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACGGCTACGTGGATTCGAGCACATCGCCTGTTCTGCGCGCCCCCACTA
Internal bar code:TTCGTAATCAAGTGGTGCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1634
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTTCACACTGCAGGTAGC
Suggested primer 2:TATGGAGGCCGCAAAGGAAG