Insertion junction: CLIP2.026086_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.026086
Chromosome:chromosome 11
Location:1464078
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g469375 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGTAGCAGCAAGAATGGAATGAAATGCTGTTCGATGAAACTGAGGGCC
Internal bar code:TTCGTAATCAAGTGGTGCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:6823
LEAP-Seq percent confirming:26.3158
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:56
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:TATGGAGGCCGCAAAGGAAG
Suggested primer 2:ACCTTCACACTGCAGGTAGC