Insertion junction: CLIP2.026103_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.026103
Chromosome:chromosome 3
Location:2888309
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162500 (1 of 4) IPR011016//IPR013083 - Zinc finger, RING-CH-type // Zinc finger, RING/FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAGTCTTTTGAGCAGTTGGATGCGGTCGGGCCGTGGCTGTGACAGGC
Internal bar code:AAAAGTCAAGCAACGCAGTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1840
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TACATTACAACAGCCGGCGT
Suggested primer 2:TTCAGCCTGGCATCACACAT