Insertion junction: CLIP2.026104_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.026104
Chromosome:chromosome 16
Location:6184840
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676850 (1 of 14) IPR003593//IPR003959//IPR027417 - AAA+ ATPase domain // ATPase, AAA-type, core // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCATCACCTCCTCGCTCGCCAATGCCGACGCCGTGCTGGCCCTGCGCG
Internal bar code:CATCGGGCATTGCCGTGCCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2697
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGATCTAGGGTGGTGGT
Suggested primer 2:GTCTGTGGAGTGGGACAGTG