Insertion junction: CLIP2.026114_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.026114
Chromosome:chromosome 12
Location:2323792
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508150 SRH21 (1 of 1) PTHR10799//PTHR10799:SF691 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // MYB DOMAIN-CONTAINING PROTEIN-RELATED; SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCGCCCTTTCACTCCCGACCGGGTCCTCACAGGATGACGCGGTGGTCT
Internal bar code:TGCCCGAATATCTAGTACAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2276
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTCTTGGCCTCCTTCACG
Suggested primer 2:TGCATCGTCAGAAGTGGTCC