Insertion junction: CLIP2.026117_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.026117
Chromosome:chromosome 6
Location:2669674
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270500 (1 of 1) PF00759//PF03067 - Glycosyl hydrolase family 9 (Glyco_hydro_9) // Chitin binding domain (Chitin_bind_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAAGGCACATCCGAGGCGGTCACGTGCGACCGCACGAGGTAGTCAGCC
Internal bar code:AAATGCGAACTCTGCTGTCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1539
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAATGACAGCTACATGGC
Suggested primer 2:GATGGGTGGGGAAGTTGGAG