Insertion junction: CLIP2.026131_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.026131
Chromosome:chromosome 2
Location:2802474
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094350 (1 of 1) PTHR23316//PTHR23316:SF30 - IMPORTIN ALPHA // SUBFAMILY NOT NAMED; Importin Alpha 1b intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGGCTACGGCCTTTAACCACAACCCAGGGTGCGCCCACAGGAAGTCG
Internal bar code:ACACTCTATGATGCATTAATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1289
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGCTTTGCGTTGGAACAC
Suggested primer 2:TGGGCAAGTGCATCAGTGAT