Insertion junction: CLIP2.026144_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.026144
Chromosome:chromosome 2
Location:5653235
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g115750 GPD9 (1 of 2) PTHR23344:SF28 - GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 1; Glycerophosphoryl diester phosphodiesterase family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTGAAAGACCGAGGCTTTTTGCATTGTCGCGGAGAGCCATGTCGATTG
Internal bar code:CCAGATACGATAGGCTGAGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3532
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGTTCCTCGTCTTTCCC
Suggested primer 2:CACAGATTGACGCAGCGATG