Insertion junction: CLIP2.026159_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.026159
Chromosome:chromosome 7
Location:989737
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319452 PHC73 Putative pherophorin-chlamydomonas homolog; (1 of 2) IPR003072//IPR003882 - Orphan nuclear receptor, NOR1 type // Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTTCCCATGCCGTGTGTTTTACACATACACACAATTTCTGCCGCCTC
Internal bar code:TTCTGATCGGTGAAACTCACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3795
LEAP-Seq percent confirming:98.1132
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTGCGTTGCTGTGGATG
Suggested primer 2:TGTTCCTTCACCTCCTCCCT