Insertion junction: CLIP2.026161_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.026161
Chromosome:chromosome 3
Location:6178942
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191200 RME3 (1 of 3) K06236 - collagen, type I/II/III/V/XI/XXIV/XXVII, alpha (COL1AS); RNA methylase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCGGTCCAATGGAGGCGACTGGTGAGGGCGGAGAGCCGGCACCCATGG
Internal bar code:TGTTGCGGCGCTCTAAACGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2463
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCTCGTTCTCTCCGCTTT
Suggested primer 2:CACACACACACACACAGCTG