Insertion junction: CLIP2.026162_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.026162
Chromosome:chromosome 12
Location:9481964
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540650 (1 of 2) PTHR19241:SF62 - PROTEIN SCARLET CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTCTTGGTGGGCGGCGGCGCCAGGCCCAGGCGGCTGAAGAAGGGCATG
Internal bar code:CACCCCGGCAGGTCGTATGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1005
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACAAGCCCTGCAAACAC
Suggested primer 2:CAGTCCACTCCACCTCAACC