Insertion junction: CLIP2.026174_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.026174
Chromosome:chromosome 10
Location:1139528
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425501 (1 of 1) K03125 - transcription initiation factor TFIID subunit 1 (TAF1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTGCCAAGGGGGCAGAAGTTCTCATGGTTTGGCGTGGCTCATGCTCG
Internal bar code:CTTTGTGTAAAGGCAGGCCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1661
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGGAGGAGGACGAAGAC
Suggested primer 2:CGTGTATAGCAGGACGGCAT