Insertion junction: CLIP2.026174_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.026174
Chromosome:chromosome 12
Location:3974452
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g515600 3'UTR
Cre12.g515650 EIF3K Eukaryotic translation initiation factor 3, subunit K; (1 of 1) K15028 - translation initiation factor 3 subunit K (EIF3K) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCACAGGAGGCACCAAACATGTTACCATGTTCGATCAGCTGTTTCAG
Internal bar code:CAAGATTATCATAGATACCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1066
LEAP-Seq percent confirming:94.2029
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCGGAATCAGAGGCAACA
Suggested primer 2:CCCTTCACGCACTCAAGTCT