Insertion junction: CLIP2.026177_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.026177
Chromosome:chromosome 12
Location:5728896
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g532350 CAV8 (1 of 2) PF00520//PF08016 - Ion transport protein (Ion_trans) // Polycystin cation channel (PKD_channel); Voltage-gated Ca2+ channel, alpha subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACCTGCTCACGCACCACCCGCCCACCTCTCACACTCCTCTCCACCAC
Internal bar code:CGAGTCTCGGATGTCATACCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:272
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACAGCCTCACTCACATT
Suggested primer 2:CGTTGGGGAGTTGCCTACAT