Insertion junction: CLIP2.026182_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.026182
Chromosome:chromosome 1
Location:489190
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800005 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTCTGGCAAGCATGATTATGCCACTTCTTCCGTCGTTGCAGTACAAGC
Internal bar code:GAGGGTCTTAACCTAAATTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2156
LEAP-Seq percent confirming:79.4118
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CACTTCTGGGTGGCGTAGTT
Suggested primer 2:CTACACGCATCCCTCATCCC